scverse / scverse/squidpy

Integration Testing CI Test Failure on python 3.13 with prerelease dependencies

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Dominant language
Python
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Avg merge
3d 11h
Merged PRs (30d)
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Description

The daily CI failed on test for squidpy failed. Please go to the logs of the integration testing repo to review. @scverse/anndata

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reviewing the linked integration-testing workflow logs for the squidpy failure under Python 3.13 with prerelease dependencies. Determine which test or dependency is failing and what change is needed; done means the integration test no longer fails in that environment.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
ci-cd, testing-qa
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
35/100

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