Get elements in a coordinate sytem
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- Dominant language
- Python
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Description
Hi,
There maybe several coordinate systems in a spatialdata object, each has some elements. For example:
global: morphology_focus (Images), cell_labels (Labels), nucleus_labels (Labels), transcripts (Points), cell_boundaries (Shapes), cell_circles (Shapes), nucleus_boundaries (Shapes)
my_other_space: my_cell_lables, my_transcipts2, my_circles2
we can only get the names of coordinate systems by sdata.coordinate_systems, is there a way to get elements names of each coordinate_systems ?
Contributor guide
First steps
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- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by inspecting the existing sdata.coordinate_systems API and how spatialdata objects associate elements with coordinate systems. Define a way to retrieve the element names for each coordinate system, then verify that it works for the global and my_other_space examples described in the issue.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- data
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 35/100