scverse / scverse/spatialdata

`polygon_query()` with `filter_table=True` on labels should filter the table.

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method: query needs: triage priority: medium
Dominant language
Python
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Merged PRs (30d)
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Description

Currently the table is filtered according to the inner call of bounding box query, which returns the bounding box query of the labels in the intrinsic coordinate system (bounding box of the back-transformed polygon into the intrinsic coordinate system of the labels).

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Research direction

Start at the polygon_query() implementation and trace how filter_table=True delegates to the inner bounding box query for labels. Reproduce the transformed-label case and verify that the table is filtered by the polygon rather than by the bounding box in the labels' intrinsic coordinate system.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
data
Issue type
Bug
Difficulty
3/5
Estimated time
1-2 days
Activity status
Active
Clarity
Mostly clear
Newbie friendliness
58/100

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