ome-zarr labels source metadata
Open
Nobody has claimed this yet.
- Dominant language
- Python
- Stars
- 394
- Forks
- 95
- Avg merge
- 4d 3h
- Merged PRs (30d)
- 7
Description
According to the ome-zarr spec (https://ngff.openmicroscopy.org/latest/#labels-md), "The value of the source key MUST be a JSON object containing information about the original image from which the label image derives." Is there a way to include this using spatialdata? Thanks.
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reading the linked OME-Zarr labels specification, then locate spatialdata's label serialization and metadata handling. Confirm how label source information is currently represented and define completion as supporting the spec-required JSON object without breaking existing label output.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- data
- Issue type
- Feature
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 30/100