scverse / scverse/spatialdata-plot
Make annotator widget available in `marimo` by using `anywidget`
Open
Nobody has claimed this yet.
- Dominant language
- Python
- Stars
- 86
- Forks
- 21
- Avg merge
- 14h 50m
- Merged PRs (30d)
- 3
Description
Description of feature
I'm trying to use the widget annotation in a marimo notebook and unfortunately I get this error:
anybioimage is built on anywidget, so using anywidget in spatialdata-plot would fix the issue.
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reproducing the annotator widget error in a marimo notebook and inspect how the widget is currently exposed by spatialdata-plot. Compare that integration with anywidget and verify that the annotator widget loads and functions in marimo without the reported error.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- data-visualization
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Quiet
- Clarity
- Mostly clear
- Newbie friendliness
- 48/100