scverse / scverse/scverse-io

IO functions: surface protein

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Description

Extra dependencies

-

Functions
  • read_10x_h5
  • read_10x_mtx

(What else is there? @gtca maybe?)

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reviewing the read_10x_h5 and read_10x_mtx entry points and determining what surface-protein formats they cover. Clarify which additional readers and extra dependencies belong in scope, then define the expected set of functions and verify that each supported format loads into the project’s AnnData or MuData outputs.

Written by the indexing model from the issue text.

Assessment

Domain
data
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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