Refactor _get_color function to stop using private scanpy functions and to work with mudata
Open
Nobody has claimed this yet.
- Dominant language
- Python
- Stars
- 265
- Forks
- 50
- Avg merge
- 9d 9h
- Merged PRs (30d)
- 4
Description
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start in scirpy/pl/styling.py at _get_color, especially lines 123-164 linked in the issue. Read the surrounding plotting and data-handling code to identify the private scanpy functions being used and how mudata should be supported. Done means the function no longer depends on those private scanpy functions and works with mudata.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- data
- Issue type
- Refactor
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100