scverse / scverse/scanpy

Pre 2.0 janitor work

Open
#4,286 0 comments 0 reactions 1 assignee View on GitHub

@Zethson is already working on this.

Since Aug 10, 2026.

Area - Documentation 📒 Area – Performance 🐌 Area – Preprocessing 🧼
Dominant language
Python
Stars
2.6k
Forks
779
Avg merge
1d 4h
Merged PRs (30d)
27

Description

  • Identify parts of the code base & algorithms that are very rarely used. Consider removing/deprecating them
  • Improve test coverage for essential parts of preprocessing & tools

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Assessment

This issue has not been assessed yet.

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.