scverse / scverse/scanpy

Highly Variable Genes Selection using CSC `dask`

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Area - Out of core 💾 Area – Performance 🐌
Dominant language
Python
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Merged PRs (30d)
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Description

What kind of feature would you like to request?

Additional function parameters / changed functionality / changed defaults?

Please describe your wishes

See #3723

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reading issue #3723, which contains the requested context for highly variable gene selection using CSC dask. Identify the relevant selection entry point and existing tests from that discussion, then define done as implementing the requested functionality with coverage for CSC dask inputs.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
bioinformatics
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Quiet
Clarity
Needs clarification
Newbie friendliness
35/100

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