scverse / scverse/muon

Broken link: tutorial for cell type annotation

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bug
Dominant language
Python
Stars
279
Forks
37
Avg merge
2h 58m
Merged PRs (30d)
6

Description

Describe the bug
One of the links for "Single-cell RNA-seq and ATAC-seq integration" tutorials, "cell-type annotation" is broken. The specific link is here: https://muon-tutorials.readthedocs.io/en/latest/single-cell-rna-atac/brain3k/2-Celltype-Annotation.ipynb

To Reproduce
Open the link in a web browser (I used Safari).

Expected behaviour
When I clicked the link, it leads to a page with the following error message:
This is a 404 error page. The link you have followed or the URL that you entered does not exist. It might be that the documentation has been updated, or this page has been removed.

Back to the front page of muon-tutorials.readthedocs.io

System

  • OS: macOS Big Sur

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Open the reported cell-type annotation URL and locate the source link for the “Single-cell RNA-seq and ATAC-seq integration” tutorial in the documentation. Confirm the intended tutorial path, update the broken link, and verify that it no longer returns a 404 page.

Written by the indexing model from the issue text.

Assessment

Domain
documentation
Issue type
Documentation
Difficulty
1/5
Estimated time
Under an hour
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

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