scverse / scverse/SnapATAC2

Integration Testing CI Install Failure on python 3.14 with prerelease dependencies

Open
#491 0 comments 0 reactions 0 assignees View on GitHub

Nobody has claimed this yet.

Dominant language
Python
Stars
323
Forks
43
PR merge metrics
No merged PRs in 30d

Description

The daily CI failed on install for SnapATAC2 failed. Please go to the logs of the integration testing repo to review. @scverse/anndata

Contributor guide

No contributing guide indexed for this repository

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start with the linked integration-testing run logs to identify why SnapATAC2 installation fails under Python 3.14 with prerelease dependencies. Then inspect the repository's CI and dependency configuration and reproduce the install failure. Done means the daily integration test can install SnapATAC2 successfully in that environment.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
ci-cd
Issue type
Bug
Difficulty
3/5
Estimated time
1-2 days
Activity status
Quiet
Clarity
Mostly clear
Newbie friendliness
48/100

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.