scverse / scverse/SnapATAC2

Integration Testing CI Test Failure on python 3.13 with prerelease dependencies

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Dominant language
Python
Stars
323
Forks
43
PR merge metrics
No merged PRs in 30d

Description

The daily CI failed on test for SnapATAC2 failed. Please go to the logs of the integration testing repo to review. @scverse/anndata

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Open the linked integration-testing GitHub Actions run and inspect the SnapATAC2 failure under Python 3.13 with prerelease dependencies. Identify the failing test and dependency information, then trace it back to the repository's CI setup. Done means the integration test passes for Python 3.13 with prerelease dependencies.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
ci-cd, testing-qa
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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