About multifactor analysis
Nobody has claimed this yet.
- Dominant language
- Python
- Stars
- 761
- Forks
- 90
- Avg merge
- 25m
- Merged PRs (30d)
- 10
Description
Is your feature request related to a problem? Please describe.
Do know if this works for factors/conditions that with a continuous number like a signature score
Describe the solution you'd like
when doing this, can the condition only be catigorical? is numerical allowed?
dds = DeseqDataSet(
counts=exp_sel,
metadata=dt_info,
design="~group+condition",
refit_cooks=True,
n_cpus=8
)
Thanks.
hfl
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reading the DeseqDataSet API and the design-formula documentation to determine whether continuous metadata are supported alongside categorical factors. Check any existing examples or tests for designs such as “~group+condition”; done means the supported behavior and required validation or documentation change are clearly established.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 30/100