scverse / scverse/Muon.jl

AnnData functions?

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enhancement good first issue
Dominant language
Julia
Stars
30
Forks
6
Avg merge
1h 29m
Merged PRs (30d)
10

Description

Does Muon support the functions from the original python AnnData? For example: adata.var_names_make_unique()?
Thanks for developing this package!

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reviewing Muon.jl's existing AnnData-related API and compare it with the original Python AnnData functions, including var_names_make_unique(). Determine which functions are in scope and how support should be verified; the issue names no files or tests, so completion criteria need to be clarified before implementation.

Written by the indexing model from the issue text.

Assessment

Tech stack
julia, python
Domain
bioinformatics, data
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
20/100

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