ImageJ Autoscale error using scitiff.
Nobody has claimed this yet.
- Dominant language
- Python
- Stars
- 0
- Forks
- 2
- Avg merge
- 9m
- Merged PRs (30d)
- 1
Description
SNS scientist reported issue using scitiff image in ImageJ where it fails to scale when ROI is NOT selected.
ImageJ should be able to compute min/max but it fails to do so unless there is a ROI selection.
My hunch is that it's because of the second/third channels (variances/mask) but I haven't reproduced it myself.
We should either find a way to avoid this problem in ImageJ or inform users how to avoid this issue.
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reproducing the ImageJ autoscale failure with a scitiff image both with and without an ROI selected. Compare behavior across the primary image and the second/third channels, then determine whether the project should prevent the failure or document a user workaround; done means the failure is understood and one of those outcomes is established.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- data
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Quiet
- Clarity
- Needs clarification
- Newbie friendliness
- 38/100