fastq doesnt add /1 or /2 to end of read names
@jenniferliddle is already working on this.
Since Mar 27, 2017.
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Description
On the samtools 1.3 release fastq doesnt add a /1 or /2 to the end of the read names in the output fastqs. So both of these command give the same result, when the -n parameter should toggle it off and on.
samtools fastq -1 1.fq -2 2.fq input.cram
samtools fastq -1 1.fq -2 2.fq -n input.cram
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