keep ID or INFO columns in the dosage output

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#1,073 1 comment 0 reactions 0 assignees View on GitHub

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Assessment

Difficulty
5/5
Estimated time
Over a week
Newbie friendliness
30/100
Issue type
Feature
Clarity
Needs clarification
Activity status
Stale
Tech stack
c
Domain
bioinformatics, cli

Research direction

Start at the +dosage entry point and read its documentation and current output behavior. Determine how requested columns would be selected and verify that ID or INFO is retained alongside CHROM, POS, REF, ALT, and sample dosage values.

Written by the indexing model from the issue text.

Description

enhancement

hello, i'm wonder in bcftools +dosage function, it looks like the output only contains [1]CHROM\t[2]POS\t[3]REF\t[4]ALT and samples' dosage.

Is there a way to keep some column (eg,. ID, INFO) in the output file? thank you so much!

Dominant language
C
Stars
891
Forks
277
Avg merge
2d 23h
Merged PRs (30d)
2

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