rstudio / rstudio/reticulate

Can not find python module on shiny

Open
#369 4 comments 0 reactions 0 assignees View on GitHub

Nobody has claimed this yet.

Dominant language
R
Stars
1.8k
Forks
349
Avg merge
5h 13m
Merged PRs (30d)
4

Description

I use the following code in ubuntu 14.04
library(reticulate)
use_python("/usr/lib/python3.5",requred=T)
np<-import("numpy")

It work perfectly when I using Rstudio.
But when I deploy my app on shinyserver, it keep showing "No module named numpy"

I'm pretty sure my python version when I using Rstudio is 3.5.2, but I can not know what my python version when my app running on shiny-server, I wonder if the error occured because my shiny use python2.7 as environment, and I haven't install numpy on the environment?

Contributor guide

No contributing guide indexed for this repository

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start with the shiny-server deployment context and compare the Python selected by use_python("/usr/lib/python3.5") with the runtime environment. Then check how np$import("numpy") resolves there; done means the import succeeds when the app runs under shiny-server.

Written by the indexing model from the issue text.

Assessment

Tech stack
python, r
Domain
devops
Issue type
Bug
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
35/100

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.