Organelle genome simulation
Open
Nobody has claimed this yet.
enhancement
- Dominant language
- Python
- Stars
- 302
- Forks
- 25
- PR merge metrics
- No merged PRs in 30d
Description
Is there an option to simulate circular genomes during badread simulation, such as organelle chloroplasts, because when I simulate organelles, the display is linear
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
No file or test is named. Start by locating the genome simulation entry point and how linear genomes are represented, then determine the expected circular behavior for organelle genomes. Done should include a supported way to simulate circular genomes and verification that the resulting display is no longer linear.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100