pepkit / pepkit/peprs

Missing features from peprs

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Dominant language
Rust
Stars
3
Forks
0
Avg merge
1d 14h
Merged PRs (30d)
2

Description

peprs-py does not support:

  • defer_samples_creation — samples always load eagerly [Won’t be implemented]
  • activate_amendments() / deactivate_amendments() / list_amendments — amendments are constructor-only
  • sample_table property (use to_polars() / to_pandas() instead)
  • subsample_table property (subsamples only via to_dict(raw=True))
  • sample_name_colname property
  • Project() with no args (empty project)
  • Sample objects (samples are plain dicts, not Sample instances)
  • Pickle support [We don't need this functionality ]
  • from_sample_yaml() / from_dict with extended=True / orient options
  • __eq__ on projects

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

No source files or tests are named. Start by locating the peprs-py entry points for the unchecked APIs listed in the issue, then confirm with maintainers which items remain in scope; done should mean the agreed features are implemented and covered by the project's existing validation.

Written by the indexing model from the issue text.

Assessment

Tech stack
python, rust
Domain
data
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Quiet
Clarity
Needs clarification
Newbie friendliness
30/100

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