owlcollab / owlcollab/owltools

Oort: consider adding Bubastis

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Java
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Description

From cmung...@gmail.com on March 11, 2013 09:11:28

http://www.ebi.ac.uk/efo/bubastis/

Context:
http://jamesmaloneebi.blogspot.co.uk/2013/02/when-will-bio-ontologies-grow-up.html

We may want to wait until James adds non-logical axiom diffs (or we could add this)

Original issue: http://code.google.com/p/owltools/issues/detail?id=57

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

No files, tests, or entry points are named. Start by reviewing the linked Bubastis resource and the linked context about non-logical axiom diffs, then inspect OWLTools' existing ontology-integration paths. Done requires an agreed scope for adding Bubastis and a defined way to verify the integration.

Written by the indexing model from the issue text.

Assessment

Tech stack
java
Domain
bioinformatics, tooling
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
20/100

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