owlcollab / owlcollab/owltools
map2slim keep originals
Open
Nobody has claimed this yet.
- Dominant language
- Java
- Stars
- 115
- Forks
- 34
- PR merge metrics
- No merged PRs in 30d
Description
Hello, is there a way to, when mapping a fine-grained .gaf file to the generic slim terms, keep the original term as well, perhaps as an additional column?
Thanks!
Contributor guide
No contributing guide indexed for this repository
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by locating the map2slim entry point and tracing how a fine-grained .gaf record is converted to slim terms. Done means the output preserves the original term in an additional column alongside the mapped slim term; no test or file is named in the issue.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- java
- Domain
- bioinformatics, cli
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100