obophenotype / obophenotype/uberon
ZFA spatial disjointness violations
Open
Nobody has claimed this yet.
- Dominant language
- Emacs Lisp
- Stars
- 163
- Forks
- 43
- Avg merge
- 1d 17h
- Merged PRs (30d)
- 5
Description
- ZFA:0000535 'lateral reticular nucleus'
- UBERON:0000955 'brain'
- UBERON:0002240 'spinal cord'
- ZFA:0000531 'lateral column'
- UBERON:0000955 'brain'
- UBERON:0002240 'spinal cord'
- ZFA:0005143 'dentine'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0005141 'tooth pulp'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0005142 'enameloid'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001530 'epibranchial 2 cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001531 'epibranchial 4 cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001533 'pharyngobranchial cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001534 'pharyngobranchial 3 cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001536 'pharyngobranchial 2 cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0009029 'odontoblast'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001529 'epibranchial 3 cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001528 'epibranchial 1 cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001527 'epibranchial cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0009087 'cementocyte'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001521 'ceratobranchial 5 cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001522 'hypobranchial cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0000488 'ceratobranchial bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001520 'ceratobranchial 1 cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001525 'hypobranchial 2 cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001526 'hypobranchial 3 cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001523 'hypobranchial 4 cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001524 'hypobranchial 1 cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001151 'tooth 4MD'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001150 'tooth 2D'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001152 'tooth 3MD'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0000356 'gill raker'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001226 'basibranchial 4'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001228 'pharyngeal arch 3 skeleton'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001229 'pharyngeal arch 7 skeleton'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001518 'ceratobranchial 3 cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001222 'copula 2'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001223 'basibranchial 1'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001519 'ceratobranchial 4 cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001516 'ceratobranchial cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001224 'basibranchial 2'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001225 'basibranchial 3'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001517 'ceratobranchial 2 cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001252 'pharyngobranchial 3 bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001251 'pharyngobranchial 4 cartilage'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001220 'copula'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001221 'copula 1'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001250 'pharyngobranchial 2 bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001144 'tooth 2V'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0000363 'hypobranchial bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001143 'tooth 4V'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001142 'tooth 5V'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001141 'tooth 1V'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001148 'tooth 1D'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001147 'tooth 2MD'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001146 'tooth 1MD'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001145 'tooth 3V'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0000694 'ceratobranchial 5 tooth'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0000658 'epibranchial bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001239 'ceratobranchial 5 bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0000527 'pharyngobranchial bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001382 'epibranchial uncinate process'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0000170 'basibranchial'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001237 'ceratobranchial 1 bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001235 'hypobranchial 3 bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001247 'epibranchial 3 bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001246 'epibranchial 2 bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001236 'hypobranchial 2 bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001245 'epibranchial 4 bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001233 'hypobranchial 1 bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001244 'epibranchial 5'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001234 'hypobranchial 4 bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001243 'epibranchial 1 bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001231 'pharyngeal arch 4 skeleton'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001242 'ceratobranchial 2 bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001232 'pharyngeal arch 5 skeleton'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001241 'ceratobranchial 3 bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001230 'pharyngeal arch 6 skeleton'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0001240 'ceratobranchial 4 bone'
- UBERON:0000033 'head'
- UBERON:0005886 'post-hyoid pharyngeal arch skeleton'
- ZFA:0005094 'optic choroid vascular plexus'
- UBERON:0001801 'anterior segment of eyeball'
- UBERON:0001802 'posterior segment of eyeball'
- ZFA:0005562 'Bruch's membrane'
- UBERON:0001801 'anterior segment of eyeball'
- UBERON:0001802 'posterior segment of eyeball'
- ZFA:0005229 'optic choroid'
- UBERON:0001801 'anterior segment of eyeball'
- UBERON:0001802 'posterior segment of eyeball'
- ZFA:0005578 'spinal nerve root'
- UBERON:0000010 'peripheral nervous system'
- UBERON:0001017 'central nervous system'
- ZFA:0001625 'optic nerve head'
- UBERON:0000010 'peripheral nervous system'
- UBERON:0001017 'central nervous system'
- ZFA:0000679 'sensory root of facial nerve'
- UBERON:0000010 'peripheral nervous system'
- UBERON:0001017 'central nervous system'
- ZFA:0000665 'rostral root of abducens nerve'
- UBERON:0000010 'peripheral nervous system'
- UBERON:0001017 'central nervous system'
- ZFA:0000705 'ventral root'
- UBERON:0000010 'peripheral nervous system'
- UBERON:0001017 'central nervous system'
- ZFA:0000652 'dorsal root'
- UBERON:0000010 'peripheral nervous system'
- UBERON:0001017 'central nervous system'
- ZFA:0000650 'dorsal motor root of V'
- UBERON:0000010 'peripheral nervous system'
- UBERON:0001017 'central nervous system'
- ZFA:0000405 'cranial nerve III'
- UBERON:0000010 'peripheral nervous system'
- UBERON:0001017 'central nervous system'
- ZFA:0000179 'caudal root of abducens nerve'
- UBERON:0000010 'peripheral nervous system'
- UBERON:0001017 'central nervous system'
- ZFA:0000435 'cranial nerve II'
- UBERON:0000010 'peripheral nervous system'
- UBERON:0001017 'central nervous system'
- ZFA:0000600 'cranial nerve IV'
- UBERON:0000010 'peripheral nervous system'
- UBERON:0001017 'central nervous system'
- ZFA:0000192 'descending trigeminal root'
- UBERON:0000010 'peripheral nervous system'
- UBERON:0001017 'central nervous system'
- ZFA:0000500 'dorsal erector'
- UBERON:0000026 'appendage'
- UBERON:0002100 'trunk'
- ZFA:0000342 'dorsal inclinator'
- UBERON:0000026 'appendage'
- UBERON:0002100 'trunk'
- ZFA:0000195 'dorsal depressor'
- UBERON:0000026 'appendage'
- UBERON:0002100 'trunk'
- ZFA:0000683 'subcommissural organ'
- UBERON:0001891 'midbrain'
- UBERON:0001894 'diencephalon'
- ZFA:0000579 'rostral mesencephalo-cerebellar tract'
- UBERON:0002037 'cerebellum'
- UBERON:0002298 'brainstem'
- ZFA:0000479 'caudal mesencephalo-cerebellar tract'
- UBERON:0002037 'cerebellum'
- UBERON:0002298 'brainstem'
- ZFA:0000291 'medial octavolateralis nucleus'
- UBERON:0002037 'cerebellum'
- UBERON:0002298 'brainstem'
- ZFA:0000636 'cerebellar crest'
- UBERON:0002037 'cerebellum'
- UBERON:0002298 'brainstem'
- ZFA:0000518 'griseum centrale'
- UBERON:0001891 'midbrain'
- UBERON:0002028 'hindbrain'
- ZFA:0000312 'mesencephalic nucleus of trigeminal nerve'
- UBERON:0001891 'midbrain'
- UBERON:0002028 'hindbrain'
- ZFA:0005733 'somatomotor neuron'
- UBERON:0001891 'midbrain'
- UBERON:0002028 'hindbrain'
- ZFA:0000366 'inferior raphe nucleus'
- UBERON:0001891 'midbrain'
- UBERON:0002028 'hindbrain'
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start with the listed ZFA and UBERON terms and determine which ontology assertions produce the reported spatial disjointness violations. Done means the relevant assertions are corrected or justified and these violations no longer appear.
Written by the indexing model from the issue text.
Assessment
- Domain
- content
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 20/100