obophenotype / obophenotype/uberon

Add 'added_by_HRA' subset to approrpriate Uberon terms

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#3,680 2 comments 0 reactions 0 assignees View on GitHub

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Dominant language
Emacs Lisp
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163
Forks
43
Avg merge
1d 17h
Merged PRs (30d)
5

Description

Need to add the subset tag to the terms that have been added to CL but the HRA team, that are outlined in this spreadsheet:
https://docs.google.com/spreadsheets/d/1YvooQLGn_wjcRJiQTrKSz5xVTWGST3Vtf7ecty7K0kQ/edit?gid=0#gid=0

This can be added via a ROBOT template.

Related to: https://github.com/obophenotype/uberon/issues/3672

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start with the linked spreadsheet and compare its listed terms with the Uberon source and the related issue #3672. Identify the existing ROBOT template used for subset tags, then apply it to the specified terms and verify that the generated ontology contains the added_by_HRA subset tag for each one.

Written by the indexing model from the issue text.

Assessment

Domain
data
Issue type
Feature
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
52/100

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