obophenotype / obophenotype/uberon
Correct "collecting duct of renal tubule" mapping to SNOMED
Open
Beginner friendly
Nobody has claimed this yet.
Stale
- Dominant language
- Emacs Lisp
- Stars
- 163
- Forks
- 43
- Avg merge
- 1d 17h
- Merged PRs (30d)
- 5
Description
collecting duct of renal tubule UBERON:0001232
Bug description
This term is mapped to SCTID:28202009 Structure of collecting duct of nipple (body structure).
This mapping should be removed.
The closest mapping I found is SCTID:732008009 Entire renal collecting system (body structure)
Thank you
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Locate UBERON:0001232 in the ontology source and inspect its SNOMED mapping. Remove the mapping to SCTID:28202009, then run the repository's available ontology validation checks to confirm the term remains valid and the incorrect mapping is gone.
Written by the indexing model from the issue text.
Assessment
- Domain
- data
- Issue type
- Bug
- Difficulty
- 2/5
- Estimated time
- 1-3 hours
- Activity status
- Quiet
- Clarity
- Clearly specified
- Newbie friendliness
- 68/100