obophenotype / obophenotype/uberon
Properties with non-standard OBO identifier structures
Nobody has claimed this yet.
- Dominant language
- Emacs Lisp
- Stars
- 163
- Forks
- 43
- Avg merge
- 1d 17h
- Merged PRs (30d)
- 5
Description
Some of these properties exist in RO or can be moved there. Otherwise, they should be replaced with numeric identifiers.
http://purl.obolibrary.org/obo/uberon/core#anastomoses_with
http://purl.obolibrary.org/obo/uberon/core#anteriorly_connected_to
http://purl.obolibrary.org/obo/uberon/core#channel_for
http://purl.obolibrary.org/obo/uberon/core#distally_connected_to
http://purl.obolibrary.org/obo/uberon/core#extends_fibers_into
http://purl.obolibrary.org/obo/uberon/core#filtered_through
http://purl.obolibrary.org/obo/uberon/core#has_start
http://purl.obolibrary.org/obo/uberon/core#in_innermost_side_of
http://purl.obolibrary.org/obo/uberon/core#in_outermost_side_of
http://purl.obolibrary.org/obo/uberon/core#indirectly_supplies
http://purl.obolibrary.org/obo/uberon/core#layer_part_of
http://purl.obolibrary.org/obo/uberon/core#posteriorly_connected_to
http://purl.obolibrary.org/obo/uberon/core#protects
http://purl.obolibrary.org/obo/uberon/core#proximally_connected_to
http://purl.obolibrary.org/obo/uberon/core#sexually_homologous_to
http://purl.obolibrary.org/obo/uberon/core#site_of
http://purl.obolibrary.org/obo/uberon/core#subdivision_of
http://purl.obolibrary.org/obo/uberon/core#transitively_anteriorly_connected_to
http://purl.obolibrary.org/obo/uberon/core#transitively_connected_to
http://purl.obolibrary.org/obo/uberon/core#transitively_distally_connected_toh
http://purl.obolibrary.org/obo/uberon/core#transitively_proximally_connected_to
http://purl.obolibrary.org/obo/uberon/core#trunk_part_of
These two already exist in RO:
http://purl.obolibrary.org/obo/uberon/core#conduit_for
http://purl.obolibrary.org/obo/uberon/core#synapsed_by
Discussion about moving these properties to RO:
http://purl.obolibrary.org/obo/uberon/core#channels_from
http://purl.obolibrary.org/obo/uberon/core#channels_into
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Review the listed UBERON properties and the linked issues 2811 and 2445 first. Determine which properties already exist in RO, which should move there, and which need numeric identifiers. Done means the unresolved properties have an agreed destination and the obsolete structures are replaced consistently.
Written by the indexing model from the issue text.
Assessment
- Domain
- data
- Issue type
- Refactor
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 25/100