obophenotype / obophenotype/uberon
Add design patterns across whole ontology, using patternizer as seed
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design_pattern
tech
- Dominant language
- Emacs Lisp
- Stars
- 163
- Forks
- 43
- Avg merge
- 1d 17h
- Merged PRs (30d)
- 5
Description
Apologies if this is duplicative, I see issues for individual patterns, but not an over-arching obe
regenerated:
https://github.com/INCATools/owl_patternizer/tree/master/examples/uberon
usual caveats apply about auto-gen results
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start with the regenerated patternizer examples in the linked examples/uberon directory and compare them with the current UBERON ontology. Determine the intended whole-ontology pattern coverage and review the auto-generated results under the stated caveats; done means the agreed patterns are applied consistently across the ontology.
Written by the indexing model from the issue text.
Assessment
- Domain
- data, tooling
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 22/100