obophenotype / obophenotype/uberon
Query UBERON_0006174 pronephric sinus
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- Emacs Lisp
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Description
Uberon term
UBERON_0006174 pronephric sinus
Bug description
UBERON_0006174 pronephric sinus is causing some reasoning problems in GO (https://github.com/geneontology/go-ontology/issues/16524; GO:0039012 pronephric sinus development ), since it is classified as a space; however the definition, as well as the paper cited in GO (https://pubmed.ncbi.nlm.nih.gov/10535314/), describes a network of capillaries. Can the definition and the placement in the ontology be made consistent? It looks like the name 'sinus' is confusing the classification.
Thanks, Pascale
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reviewing the UBERON_0006174 term, its definition, placement, and the cited paper. Compare those details with GO issue 16524 and GO:0039012 pronephric sinus development. Done means the term's definition and ontology placement consistently represent the anatomical entity described by the evidence.
Written by the indexing model from the issue text.
Assessment
- Domain
- content
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 25/100