obophenotype / obophenotype/uberon

QC: Need cycle detection on basic.owl

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#1,829 11 comments 0 reactions 2 assignees View on GitHub

@anitacaron is already working on this.

Since Feb 1, 2022.

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Emacs Lisp
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Description

We need to check basic for cycles ideally in basic file. High priority. Maybe ontobio. The old command is deprecated:

$(REPORTDIR)/%-cycles: %.obo
	echo "STRONG WARNING: $@ skipped, because there is no more blip." && touch $@
#	owltools --no-debug $< --list-cycles -f > $@
	#blip-findall -i $< "subclass_cycle/2" -label > $@

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