obophenotype / obophenotype/uberon
obsolete specialized hemal arch and spine
Nobody has claimed this yet.
- Dominant language
- Emacs Lisp
- Stars
- 163
- Forks
- 43
- Avg merge
- 1d 17h
- Merged PRs (30d)
- 5
Description
'specialized hemal arch and spine’
http://purl.obolibrary.org/obo/UBERON_2000859
This term is appearing in phenoscape’s inferred presence results, but it doesn’t seem to refer to a known structure in fishes. Seems it was created based on this document https://zfin.org/ZDB-PUB-011008-1 (see IIC. Specialized hemal arches and spines) where the phrase "specialized hemal arch and spines" is a heading for discussion of the specific structures ‘hypural’, ‘parhypural’, 'hypurapophyses/ parhypurapophyses’. Recommending we obsolete this and if any annotations exist, use the more specific terms.
@laurajackson @cerivs
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reviewing ontology term UBERON_2000859 and the cited ZFIN document, especially section IIC. Search the ontology for annotations to this term and compare them with the specific hypural, parhypural, and hypurapophysis/parhypurapophysis terms. Done means the obsolete term is handled and any annotations use the appropriate specific terms.
Written by the indexing model from the issue text.
Assessment
- Domain
- content
- Issue type
- Bug
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Clearly specified
- Newbie friendliness
- 45/100