Some files were not copied to .output/server/node_modules during build

Forwarded from downstream issue: https://github.com/nuxt/nuxt/issues/22325 by @dongnaebi

Environment

• Operating System: Windows_NT
• Node Version: v18.16.1
• Nuxt Version: 3.6.1
• Nitro Version: 2.5.1
• Package Manager: pnpm@7.13.6
• Builder: vite
• User Config: modules, colorMode
• Runtime Modules: @nuxtjs/tailwindcss@6.8.0, nuxt-icon@0.3.3, @nuxtjs/color-mode@3.3.0
• Build Modules: -

Reproduction

https://stackblitz.com/edit/nuxt-starter-amtrbm?file=server%2Fapi%2Ficons.ts

Steps:

npm run build

npm run preview

visit /api/icons

Describe the bug

no such file or directory, open '/home/projects/nuxt-starter-amtrbm/.output/server/node_modules/@iconify/json/collections.json

My api depends on iconify's api, but after build, the main files of the @iconify/json package were not copied to the .output/server/node_modules/@iconify/json directory

I saw a similar issue: https://github.com/nuxt/nuxt/issues/13131

Additional context

It works in nuxt dev

correct directory structure：

Logs

{"url":"/api/icons","statusCode":500,"statusMessage":"","message":"ENOENT: no such file or directory, open '/home/projects/nuxt-starter-amtrbm/.output/server/node_modules/@iconify/json/collections.json'","stack":""}

Start with the reproduction's server/api/icons.ts entry point and run npm run build followed by npm run preview. Inspect the generated .output/server/node_modules/@iconify/json contents and compare them with the package's expected files; done means the /api/icons request can read collections.json after a production build.