nf-core / nf-core/tools

type dir output

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Dominant language
Python
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Description

Something weird is happening with dir output

So I had to put this in the meta.tml for the linting to be happy:

  - '"${prefix}", type: "dir"':

Originally posted by @maxulysse in https://github.com/nf-core/modules/pull/9705#discussion_r2708383696

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First steps

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  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reproducing the reported linting problem from the meta.tml entry containing the type: "dir" declaration. Trace the linting handling for directory output and determine the expected representation; done means the valid entry no longer requires the reported workaround and the relevant linting check passes.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
tooling
Issue type
Bug
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
35/100

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