Enable configurations for module linting
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- Dominant language
- Python
- Stars
- 322
- Forks
- 255
- Avg merge
- 2d 3h
- Merged PRs (30d)
- 5
Description
Description of feature
On a module level we can currently only decide if we want to run the linting for a file or not. This is for all linting in that file. When hosting a modules repo outside of nf-core it would be helpful to be able to configure the linting more granularly, for example: lint the main.nf but skip linting for whether a label is present.
Slack convo: https://nfcore.slack.com/archives/CE5LG7WMB/p1751539469307559
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
The issue names no files or tests; start by locating the module-level lint configuration and the code that selects lint rules for a file. Done means a module can enable linting for selected files while skipping individual checks such as label presence, with coverage for the configuration behavior.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- tooling
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100