nf-test local modules/subworkflows of nf-core pipelines on GitHub actions
Open
Nobody has claimed this yet.
enhancement
- Dominant language
- Python
- Stars
- 322
- Forks
- 255
- Avg merge
- 2d 3h
- Merged PRs (30d)
- 5
Description
Description of feature
A mechanism that will allow local module/subworkflow tests to be automatically picked up when merging to dev/main.
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reviewing the repository's GitHub Actions configuration and any existing nf-test setup. Determine how local modules and subworkflows are identified, then define and verify automatic test selection when changes merge to dev or main.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- github-actions, python
- Domain
- bioinformatics, ci-cd, testing-qa
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100