nf-core pipelines bump-version doesn't consider skipped features
Open
Nobody has claimed this yet.
bug
- Dominant language
- Python
- Stars
- 322
- Forks
- 255
- Avg merge
- 2d 3h
- Merged PRs (30d)
- 5
Description
Description of the bug
E.g. it throws a warning that it couldn't fine the multiqc config, even though it is due to it being skipped in the template render
Command used and terminal output
No response
System information
No response
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start at the nf-core pipelines bump-version command and trace how template rendering handles skipped features, using the reported missing multiqc config warning as the reproduction. Done means skipped features no longer produce a warning about files that were intentionally omitted.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- cli, tooling
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 35/100