nf-core / nf-core/tools

Add a linting test for the metro map

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#3,135 0 comments 0 reactions 0 assignees View on GitHub

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enhancement
Dominant language
Python
Stars
322
Forks
255
Avg merge
2d 3h
Merged PRs (30d)
5

Description

Description of feature

Names for the metro map are not the same at all from one pipeline to another.
It'll be nice to add a linting test for that.
We might need to come up with a coherent name that we can agree on.

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

The issue names the metro map and a desired linting test but no files or existing tests. First locate the metro map implementation and current linting tests, then clarify and agree on a coherent naming scheme across pipelines. Done means the agreed names are enforced by a test.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
testing-qa, tooling
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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