Update CI workflow for pipelines
Nobody has claimed this yet.
- Dominant language
- Python
- Stars
- 322
- Forks
- 255
- Avg merge
- 2d 3h
- Merged PRs (30d)
- 5
Description
Description of feature
nf-core/fetchngs uses a new strategy based on scraping the information via Python to list and fetch all changed files, plus dependencies. It then lists all relevant nf-test files and uses them in a testing matrix.
We need to migrate this feature to the template. We should just be able to copy+paste the files.
https://github.com/nf-core/fetchngs/pull/271
https://github.com/nf-core/fetchngs/pull/300
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Compare .github/workflows/ci.yml and .github/python/find_changed_files.py in nf-core/fetchngs with the nf-core/tools template, starting from the referenced files and pull requests 271 and 300. Done means the template contains the changed-file and nf-test matrix workflow strategy and its CI configuration works consistently.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- github-actions, python
- Domain
- ci-cd, tooling
- Issue type
- Feature
- Difficulty
- 2/5
- Estimated time
- 1-3 hours
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100