AssertionError edge-case for CUSTOM DUMPSOFTWAREVERSIONS
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bug
- Dominant language
- Python
- Stars
- 322
- Forks
- 255
- Avg merge
- 2d 3h
- Merged PRs (30d)
- 5
Description
Description of the bug
Hi NF-CORE,
Got this error when running Atacseq:
I checked the collated_versions.yml file, and found the following lines which seem to be the culprit:
Kind regards,
Martin
Command used and terminal output
No response
System information
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Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by inspecting how CUSTOM DUMPSOFTWAREVERSIONS is handled and reproduce the failure using the Atacseq context and the collated_versions.yml lines shown in the report. Done means the assertion no longer occurs for this edge case and the relevant behavior is covered by an appropriate test.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- tooling
- Issue type
- Bug
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 35/100