nf-core / nf-core/tools

Automate pushing releases to WorkflowHub

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#2,567 3 comments 0 reactions 0 assignees View on GitHub

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automation template
Dominant language
Python
Stars
322
Forks
255
Avg merge
2d 3h
Merged PRs (30d)
5

Description

Description of feature

Write a GitHub action that automatically pushes new pipeline releases to https://workflowhub.eu/

Workflows should use a bespoke RO-Crate, so this depends on https://github.com/nf-core/tools/pull/703

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start with the GitHub Action entry point and the WorkflowHub RO-Crate API and format documentation linked in the issue; first check the status and compatibility of nf-core/tools PR 703. Done means new pipeline releases are packaged as the bespoke RO-Crate and pushed automatically to WorkflowHub.

Written by the indexing model from the issue text.

Assessment

Tech stack
github-actions, python
Domain
ci-cd, devops, release
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
42/100

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