nf-core / nf-core/tools

Add `nf-core modules/subworkflows rename`

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command line tools enhancement infrastructure modules subworkflows
Dominant language
Python
Stars
322
Forks
255
Avg merge
2d 3h
Merged PRs (30d)
5

Description

Description of feature

Because this involves more then just renaming files (see https://github.com/nf-core/modules/pull/3427), we should handle all the necessary steps in the tools or at least add documentation on how to do it.

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start with the existing nf-core modules/subworkflows CLI entry points and review the pull request linked in the issue body for the required rename steps. Done means the command handles the necessary operations beyond file renaming, or the project documentation clearly records those steps.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
cli, tooling
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
32/100

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