CLI wizard for building a Nextflow config
Nobody has claimed this yet.
- Dominant language
- Python
- Stars
- 322
- Forks
- 255
- Avg merge
- 2d 3h
- Merged PRs (30d)
- 5
Description
Description of feature
It would be great to have an nf-core config command with a wizard similar to nf-core launch that builds a config file. Goes through common options like container engine and executor, not params.
Could also be optionally invoked as part of nf-core launch, maybe in combination with choosing a profile from nf-core/configs.
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by locating the CLI implementation for nf-core launch and how it selects profiles from nf-core/configs. Define the entry point and wizard flow for nf-core config, covering common container-engine and executor options while excluding params. Done means the command builds a usable Nextflow config and its optional integration with nf-core launch is specified.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- cli
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100