nf-core / nf-core/stats

Dependency Dashboard

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Dominant language
Python
Stars
2
Forks
4
PR merge metrics
No merged PRs in 30d

Description

This issue lists Renovate updates and detected dependencies. Read the Dependency Dashboard docs to learn more.
View this repository on the Mend.io Web Portal.

Awaiting Schedule

The following updates are awaiting their schedule. To get an update now, click on a checkbox below.

  • chore(deps): update fkirc/skip-duplicate-actions digest to b974a93
  • chore(deps): update astral-sh/setup-uv action to v10
  • 🔐 Create all awaiting schedule PRs at once 🔐

PR Edited (Blocked)

The following updates have been manually edited so Renovate will no longer make changes. To discard all commits and start over, click on a checkbox below.

  • fix(deps): update all non-major dependencies (@evidence-dev/core-components, @evidence-dev/csv, @evidence-dev/duckdb, @evidence-dev/evidence, @evidence-dev/motherduck, actions/checkout, astral-sh/setup-uv, aws-actions/configure-aws-credentials, python-dotenv)

Open

The following updates have all been created. To force a retry/rebase of any, click on a checkbox below.

PR Closed (Blocked)

The following updates are blocked by an existing closed PR. To recreate the PR, click on a checkbox below.

Detected Dependencies

devcontainer (1)
.devcontainer/devcontainer.json (1)
  • mcr.microsoft.com/devcontainers/javascript-node 0-18-bullseye → [Updates: 1-18-bullseye]
github-actions (3)
.github/workflows/build.yml
.github/workflows/check_sources.yml (1)
  • actions/checkout v7.0.0@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 → [Updates: v7.0.1]
.github/workflows/run_pipelines.yml (5)
  • fkirc/skip-duplicate-actions v5@f75f66ce1886f00957d99748a42c724f4330bdcf → [Updates: v5]
  • actions/checkout v7.0.0@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 → [Updates: v7.0.1]
  • astral-sh/setup-uv v8.2.0@fac544c07dec837d0ccb6301d7b5580bf5edae39 → [Updates: v8.3.2, v10.1.0]
  • aws-actions/configure-aws-credentials v6.2.0@e7f100cf4c008499ea8adda475de1042d6975c7b → [Updates: v6.3.0]
  • actions/upload-artifact v7@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a
npm (1)
package.json (7)
  • @evidence-dev/core-components ^5.4.0 → [Updates: ^5.4.0]
  • @evidence-dev/csv ^1.0.15 → [Updates: ^1.0.15]
  • @evidence-dev/duckdb ^2.0.0 → [Updates: ^2.0.0]
  • @evidence-dev/evidence ^40.1.6 → [Updates: ^40.1.6]
  • @evidence-dev/motherduck ^1.0.5 → [Updates: ^1.0.5]
  • npm >=7.0.0
  • node >=18.0.0 <25.0.0
pep621 (1)
pipeline/pyproject.toml (8)
  • python >=3.10
  • boto3 >=1.35.0
  • cyclopts >=4.1.0
  • dlt >=1.18.2
  • python-dotenv ==1.2.2 → [Updates: ==1.2.3]
  • requests >=2.31.0
  • semanticscholar >=0.11.0
  • slack-sdk >=3.33.5
pyenv (1)
pipeline/.python-version (1)
  • python 3.14

  • Check this box to trigger a request for Renovate to run again on this repository

Contributor guide

No contributing guide indexed for this repository

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

This is an autogenerated Renovate dashboard; start with .devcontainer/devcontainer.json, .github/workflows/check_sources.yml, .github/workflows/run_pipelines.yml, package.json, and pipeline/pyproject.toml, then review linked PRs 122 and 125. No standalone change or completion criteria are defined; done would require a specific dependency update selected and verified by the relevant checks.

Written by the indexing model from the issue text.

Assessment

Tech stack
docker, github-actions, javascript, node.js, python
Domain
build-system, ci-cd, devops
Issue type
Refactor
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
8/100

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