nf-core / nf-core/stats

It'd be nice if we could do more stuff with publications :thinking_face:

Open
#110 0 comments 1 reaction 0 assignees View on GitHub

Nobody has claimed this yet.

Dominant language
Python
Stars
2
Forks
4
PR merge metrics
No merged PRs in 30d

Description

Slack Message

Have more metrics about publications in https://nf-core-stats.netlify.app/

I mean, we have https://nf-co.re/publications already - but no consolidated stats about number of publications over time, citations for those papers, and so on
nf-co.re Publications
Publications about nf-core and nf-core pipelines
https://nf-co.re/publications

The GA4GH notebook above has some nice plots: growth over time, top journals and so on. I reckon it wouldn't be so difficult to do given that we already have a giant list of DOIs.

From @ewels

Contributor guide

No contributing guide indexed for this repository

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reviewing the existing nf-core-stats site and its giant list of DOIs, then compare the requested ideas with the nf-core publications page and the GA4GH notebook's plots. Clarify which metrics and visualizations are in scope, such as publications over time, citations, growth, and top journals. Done means the selected consolidated publication statistics are available in nf-core-stats.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
analytics, data-visualization
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
35/100

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.