nf-core / nf-core/stableexpression
Increase default allowed time for `IMPUTE_MISSING_VALUES` module
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@OlivierCoen is already working on this.
Since Sep 16, 2026.
bug
- Dominant language
- Python
- Stars
- 9
- Forks
- 3
- Avg merge
- 3d 5h
- Merged PRs (30d)
- 3
Description
Description of the bug
When running the pipeline on a species like Arabidopsis thaliana with a very high sampling size, the imputation step takes a long time to complete and eventually fails because of a time out.
This should be fixed by adding a specific label to the module.
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