nf-core / nf-core/spatialvi

Add segmentation using Cellpose and Stardist

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#145 0 comments 0 reactions 2 assignees View on GitHub

@cavenel is already working on this.

Since Jun 22, 2026.

enhancement
Dominant language
Nextflow
Stars
81
Forks
40
Avg merge
7d 9h
Merged PRs (30d)
4

Description

Description of feature

There are nf-core modules for both segmentation methods.

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