[add] module ResolVI
Nobody has claimed this yet.
- Dominant language
- Python
- Stars
- 46
- Forks
- 23
- PR merge metrics
- No merged PRs in 30d
Description
Description of feature
A module for ResolVI
https://www.biorxiv.org/content/10.1101/2025.01.20.634005v1
Its nice that it is part of scvi-tools (quite a stable tool package)
ResolVI is part of the scvi-tools framework and is currently provided at https://github.com/scverse/scvi-tools/pull/3144.
Documentation: https://docs.scvi-tools.org/en/stable/user_guide/models/resolvi.html
Could be used as another refinement method next to segger.
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reading the ResolVI paper, the scvi-tools pull request 3144, and the scvi-tools documentation linked in the issue. Compare the proposed module with the existing segger refinement method and determine the integration points; done means ResolVI is available as another refinement method in spatialaxe.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- bioinformatics, machine-learning
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100