nf-core / nf-core/spatialaxe

[add] module troutpy

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module prio3 qc
Dominant language
Python
Stars
46
Forks
23
PR merge metrics
No merged PRs in 30d

Description

Description of feature

https://github.com/theislab/troutpy

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reviewing the linked troutpy project and the spatialaxe repository's existing module conventions. Determine the required integration and validation steps from those sources; the work is done when troutpy is available as a functioning spatialaxe module and the relevant pipeline checks pass.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
bioinformatics
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
30/100

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