Add recipes to bioconda
Open
Nobody has claimed this yet.
enhancement
- Dominant language
- Nextflow
- Stars
- 20
- Forks
- 8
- Avg merge
- 1d 10h
- Merged PRs (30d)
- 4
Description
Description of feature
Add Baysor recipe to bioconda + enable conda usage for non-Visium-HD techs
NB: Visium-HD requires space_ranger, which doesn't support conda anyway
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reviewing the repository’s workflow and dependency configuration, then identify how non-Visium-HD technologies are selected and where Bioconda recipes belong. Done means a Baysor recipe is available and Conda usage works for the supported non-Visium-HD technologies, while Visium-HD remains documented as requiring Space Ranger.
Written by the indexing model from the issue text.
Assessment
- Domain
- bioinformatics, build-system
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Quiet
- Clarity
- Mostly clear
- Newbie friendliness
- 48/100