Refactoring of FIND_CONCATENATE usage: replace with collectFile() operator
Open
Nobody has claimed this yet.
enhancement
- Dominant language
- Nextflow
- Stars
- 18
- Forks
- 8
- PR merge metrics
- No merged PRs in 30d
Description
Description of feature
To reduce the number of submitted jobs
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by locating the FIND_CONCATENATE usage in the pipeline and reading how it currently submits jobs. Compare that flow with the collectFile() operator, then verify that the refactoring reduces the number of submitted jobs without changing the data submission behavior.
Written by the indexing model from the issue text.
Assessment
- Domain
- data-engineering
- Issue type
- Refactor
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Active
- Clarity
- Needs clarification
- Newbie friendliness
- 45/100