Add `trimming` step
Open
Nobody has claimed this yet.
enhancement
- Dominant language
- Nextflow
- Stars
- 61
- Forks
- 47
- Avg merge
- 1d 1h
- Merged PRs (30d)
- 1
Description
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reviewing the rnavar workflow and the linked nf-core/rnaseq introduction to understand how adapter and quality trimming are handled there. Confirm the appropriate workflow entry point and define done as rnavar including both trimming steps before its RNA variant-calling stages.
Written by the indexing model from the issue text.
Assessment
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 28/100